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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11989414 chr8:14636322 G/T NEIL2 chr8:11627148-11644855:+ -0.71 -6.43 3.8E-10 Box Plot
BLCA rs11989414 chr8:14636322 G/T TMEM66 chr8:29920528-29939940:- -0.62 -6.36 5.72E-10 Box Plot
BLCA rs11989414 chr8:14636322 G/T TNKS chr8:9413424-9639856:+ -0.61 -6.78 4.46E-11 Box Plot
BLCA rs11990387 chr8:12699556 C/T CCDC25 chr8:27590828-27630170:- -0.92 -6.97 1.41E-11 Box Plot
BLCA rs11990387 chr8:12699556 C/T CDCA2 chr8:25316513-25365436:+ -0.61 -6.79 4.18E-11 Box Plot
BLCA rs11990387 chr8:12699556 C/T CHMP7 chr8:23101150-23119513:+ -0.87 -7.07 7.56E-12 Box Plot
BLCA rs11990387 chr8:12699556 C/T CNOT7 chr8:17082473-17104387:- -0.86 -6.66 9.66E-11 Box Plot
BLCA rs11990387 chr8:12699556 C/T ELP3 chr8:27947190-28048673:+ -0.82 -5.99 4.92E-9 Box Plot
BLCA rs11990387 chr8:12699556 C/T GTF2E2 chr8:30435835-30515768:- -0.82 -6.28 9.46E-10 Box Plot
BLCA rs11990387 chr8:12699556 C/T HMBOX1 chr8:28747911-28922281:+ -0.85 -6.89 2.34E-11 Box Plot
BLCA rs11990387 chr8:12699556 C/T INTS9 chr8:28625178-28747759:- -0.95 -7.13 4.9E-12 Box Plot
BLCA rs11990387 chr8:12699556 C/T KCTD9 chr8:25285363-25315992:- -0.74 -7.13 5.14E-12 Box Plot
BLCA rs11990387 chr8:12699556 C/T KIAA1967 chr8:22462257-22477981:+ -0.88 -6.72 6.8E-11 Box Plot
BLCA rs11990387 chr8:12699556 C/T LEPROTL1 chr8:29952914-30034724:+ -0.87 -6.38 4.97E-10 Box Plot
BLCA rs11990387 chr8:12699556 C/T MCPH1 chr8:6264113-6506025:+ -0.87 -6.57 1.65E-10 Box Plot